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Слайды и текст к этой презентации:
№1 слайд
Содержание слайда: Information
Discipline: Bioorganic chemistry
Final assessment: test
Lecturer: PhD, docent Irina Vyacheslavovna Tarasova (department of organic chemistry)
e-mail: tarasova_iv_mrsu@mail.ru
web: http://vk.com/club114428385
№2 слайд
Содержание слайда: General aspects of chemical structure and reactivity of organic compounds
Lecture №1
№3 слайд
Содержание слайда: Chemical bonding and mutual atoms’ influence in organic molecules
№4 слайд
Содержание слайда: Electronic configuration of carbon atom in organic molecules
№5 слайд
Содержание слайда: Atomic orbitals
№6 слайд
Содержание слайда: Hybridization of orbitals
Hybridization is the process of atomic orbitals alignment in form and energy.
№7 слайд
Содержание слайда: sp3-Hybridization
№8 слайд
Содержание слайда: sp2-Hybridization
№9 слайд
Содержание слайда: sp-Hybridization
№10 слайд
Содержание слайда: Chemical bonds in organic compounds
Covalent bonds
- bond π - bond
№11 слайд
Содержание слайда: Conjugation
Conjugation is the formation of delocalized electronic cloud in molecule as a result of p-orbitals overlap.
π,π-Conjugation is the type of orbital interaction when the p-orbitals are delocalized over the entire π system.
p,π-Conjugation is the overlap of a p-orbital on an atom adjacent to a double bond.
№12 слайд
Содержание слайда: π,π-Conjugation
№13 слайд
Содержание слайда: р,π-Conjugation
№14 слайд
Содержание слайда: Aromaticity
№15 слайд
Содержание слайда: Inductive effect
Inductive effect (I) is the shifting of electrons in a -bond in response to electronegativity of nearby atoms.
present in any polar molecule;
decrease and fade after 2-3 bonds.
СН3СН2Сl CH3CH2MgCl
№16 слайд
Содержание слайда: Mesomeric effect
Mesomeric effect (М) is the shifting of electron density caused by a substituent in conjugation system through p-orbital overlap.
present only in conjugation systems;
distribute throughout the conjugated system.
№17 слайд
Содержание слайда: Electron donors (D) and electron withdrawers (W)
№18 слайд
Содержание слайда: Spatial structure of organic compounds
№19 слайд
Содержание слайда: Isomerism of organic compounds
Isomers are the compounds which have the same composition but different sequence of atoms or their location in space, therefore have different properties.
№20 слайд
Содержание слайда: Stereoisomerism
Stereoisomers are the compounds that have the same order of atoms attachment but differ only in the arrangement of their atoms or groups in space.
№21 слайд
Содержание слайда: Configuration is the arrangement of atoms and groups in space without regard to arrangements that differ only due to rotation about one or more single bonds.
Configuration is the arrangement of atoms and groups in space without regard to arrangements that differ only due to rotation about one or more single bonds.
Carbon atom configurations
№22 слайд
Содержание слайда: Chirality
Chirality is the property of the object to be nonsuperposable with its mirror image.
The simple example of chirality is presence the chiral center in molecule.
It may be carbon atom with four different atoms or groups - asymmetric carbon atom (*С).
Such molecules have optical activity – they rotate the plane of polarized light.
Types of isomers:
enantiomers
diastereomers
№23 слайд
Содержание слайда: Enantiomers
Enantiomers are the stereoisomers, the molecules of which relate to each other as an object and its nonsuperposable mirror image.
enantiomers have the same physical and chemical properties;
enantiomers have optical activity.
№24 слайд
Содержание слайда: Fischer projections
№25 слайд
Содержание слайда: D,L-Nomenclature
Glyceraldehyde is the configurational standard.
Fischer projection writes in “standard view”. We can do the interchanges or rotate the projection through 180o to achieve the “standard view”.
If the group lies on the left side we name it as levorotatory enantiomer (L). If the group lies on the right side we name it as dextrorotatory enantiomer (D).
№26 слайд
Содержание слайда: R,S-Nomenclature
The least substituent near the chiral center must lie at the bottom of the Fischer projection.
Atoms attached directly to the chiral center are first arranged according to decreased atomic number.
If the remaining three groups are arranged clockwise, the configuration is symbolized by R. If they form a counterclockwise array, the configuration is symbolized by S.
№27 слайд
Содержание слайда: Diastereomers
Diastereomers are the stereoisomers that are not mirror images of one another.
they have different physical and chemical properties.
№28 слайд
Содержание слайда: meso Compounds
№29 слайд
Содержание слайда: Acidity and basicity
of organic compounds
№30 слайд
Содержание слайда: Acidity and basicity are the key notions, determining many fundamental physico-chemical and biochemical properties of organic compounds.
Acidity and basicity are the key notions, determining many fundamental physico-chemical and biochemical properties of organic compounds.
№31 слайд
Содержание слайда: Brønstedt-Lowry concept
№32 слайд
Содержание слайда: Brønstedt acids
Acidic site is a part of molecule that involves hydrogen together with an atom attached to it.
№33 слайд
Содержание слайда: Brønstedt bases
Basic site is a heteroatom with a lone-pair of electrons or a -bond which are capable to accept a proton.
№34 слайд
Содержание слайда: Comparison the acidity
The more stable is an anion, the stronger is an acid!
The factors which influence the stability of conjugate bases:
electronegativity and polarizability of the atom in the acidic site;
delocalization of a negative charge due to the effect of substituens in a molecule;
solvation effects.
№35 слайд
Содержание слайда: The influence of atom nature in acidic site
СН NH ОН
SH
СН NH ОН SH
№36 слайд
Содержание слайда: The influence of substituents effects
inductive effect
mesomeric effect
№37 слайд
Содержание слайда: Comparison the basicity
The more stable is an cation and the more available a lone-pair of electrons, the stronger is an base!
The factors which influence the stability of conjugate acids is the same but they act in the opposite direction:
.
№38 слайд
Содержание слайда: The influence of atom nature in the basic site
S О N
The influence of substituents effects
№39 слайд
Содержание слайда: Lewis concept